Agilent Measurement Journal - Issue 3 - 2007 - (Page 62) Original TIC 5 Intensity (10x6) 4 3 2 1 0 Min 5 10 15 20 25 30 Processed TIC 5 Intensity (10x6) 4 3 2 1 0 Min 5 10 15 20 25 30 Figure 7. This shows rice LC/MS TICs before (original) and after (processed). Files were deconvoluted and background subtracted using Agilent MassHunter software. 42 Immunity features Bacterial features 25 22 Infected features 7 39 TP309 TP 309 Xa21+ Group Sample Number File Name Rice Lines 42 170 Rice line features Align and normalize features Hierarchical clustering to check for reproducibility of biological replicates Analysis of variance to find features with statistically significant differences between classes Y 1 Infected wild and transgenic 0 0 1 Uninfected transgenic X 0 Uninfected wild 1 Z Create inclusion lists for database searching and MS/MS analysis Fold-change filtering to select the features with the largest differences in abundance Principle component analysis of significantly different features representing class differences Figure 8. This was the data analysis workflow of the processed TIC files in GeneSpring MS statistical and visualization software. 62 Agilent Measurement Journal
Table of Contents Feed for the Digital Edition of Agilent Measurement Journal - Issue 3 - 2007 Applying Ingenuity to the Measurement of Emerging Technologies Contents Emerging Innovations Department Delivering Bigger Benefits by Optimizing Customer Workflows Measuring Material Properties at the Nanoscale Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications WiMAX™: Plotting a New Path to Global Mobility Addressing the Triple Complexity of Triple-Play Networks What Next for Mobile Telephony? Exploring the Inner Workings of Tire-Pressure Monitoring Systems Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe Making Accurate Settling-Time Measurements Using a Vector Network Analyzer Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants Measuring Stream Dynamics with Fiber Optics survey Agilent Measurement Journal - Issue 3 - 2007 Agilent Measurement Journal - Issue 3 - 2007 - (Page 1) Agilent Measurement Journal - Issue 3 - 2007 - Applying Ingenuity to the Measurement of Emerging Technologies (Page 2) Agilent Measurement Journal - Issue 3 - 2007 - Applying Ingenuity to the Measurement of Emerging Technologies (Page 3) Agilent Measurement Journal - Issue 3 - 2007 - Contents (Page 4) Agilent Measurement Journal - Issue 3 - 2007 - Contents (Page 5) Agilent Measurement Journal - Issue 3 - 2007 - Emerging Innovations Department (Page 6) Agilent Measurement Journal - Issue 3 - 2007 - Emerging Innovations Department (Page 7) Agilent Measurement Journal - Issue 3 - 2007 - Delivering Bigger Benefits by Optimizing Customer Workflows (Page 8) Agilent Measurement Journal - Issue 3 - 2007 - Delivering Bigger Benefits by Optimizing Customer Workflows (Page 9) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 10) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 11) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 12) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 13) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 14) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 15) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 16) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Material Properties at the Nanoscale (Page 17) Agilent Measurement Journal - Issue 3 - 2007 - Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications (Page 18) Agilent Measurement Journal - Issue 3 - 2007 - Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications (Page 19) Agilent Measurement Journal - Issue 3 - 2007 - Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications (Page 20) Agilent Measurement Journal - Issue 3 - 2007 - Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications (Page 21) Agilent Measurement Journal - Issue 3 - 2007 - Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications (Page 22) Agilent Measurement Journal - Issue 3 - 2007 - Utilizing In Situ Atomic Force Microscopy in Life Science, Pharmaceutical and other Bio-Related Applications (Page 23) Agilent Measurement Journal - Issue 3 - 2007 - WiMAX™: Plotting a New Path to Global Mobility (Page 24) Agilent Measurement Journal - Issue 3 - 2007 - WiMAX™: Plotting a New Path to Global Mobility (Page 25) Agilent Measurement Journal - Issue 3 - 2007 - WiMAX™: Plotting a New Path to Global Mobility (Page 26) Agilent Measurement Journal - Issue 3 - 2007 - WiMAX™: Plotting a New Path to Global Mobility (Page 27) Agilent Measurement Journal - Issue 3 - 2007 - Addressing the Triple Complexity of Triple-Play Networks (Page 28) Agilent Measurement Journal - Issue 3 - 2007 - Addressing the Triple Complexity of Triple-Play Networks (Page 29) Agilent Measurement Journal - Issue 3 - 2007 - Addressing the Triple Complexity of Triple-Play Networks (Page 30) Agilent Measurement Journal - Issue 3 - 2007 - Addressing the Triple Complexity of Triple-Play Networks (Page 31) Agilent Measurement Journal - Issue 3 - 2007 - What Next for Mobile Telephony? (Page 32) Agilent Measurement Journal - Issue 3 - 2007 - What Next for Mobile Telephony? (Page 33) Agilent Measurement Journal - Issue 3 - 2007 - What Next for Mobile Telephony? (Page 34) Agilent Measurement Journal - Issue 3 - 2007 - What Next for Mobile Telephony? (Page 35) Agilent Measurement Journal - Issue 3 - 2007 - What Next for Mobile Telephony? (Page 36) Agilent Measurement Journal - Issue 3 - 2007 - What Next for Mobile Telephony? (Page 37) Agilent Measurement Journal - Issue 3 - 2007 - Exploring the Inner Workings of Tire-Pressure Monitoring Systems (Page 38) Agilent Measurement Journal - Issue 3 - 2007 - Exploring the Inner Workings of Tire-Pressure Monitoring Systems (Page 39) Agilent Measurement Journal - Issue 3 - 2007 - Exploring the Inner Workings of Tire-Pressure Monitoring Systems (Page 40) Agilent Measurement Journal - Issue 3 - 2007 - Exploring the Inner Workings of Tire-Pressure Monitoring Systems (Page 41) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 42) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 43) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 44) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 45) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 46) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 47) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 48) Agilent Measurement Journal - Issue 3 - 2007 - Developing, Assessing and Applying a High-Resolution Thin-Film Magnetic Probe (Page 49) Agilent Measurement Journal - Issue 3 - 2007 - Making Accurate Settling-Time Measurements Using a Vector Network Analyzer (Page 50) Agilent Measurement Journal - Issue 3 - 2007 - Making Accurate Settling-Time Measurements Using a Vector Network Analyzer (Page 51) Agilent Measurement Journal - Issue 3 - 2007 - Making Accurate Settling-Time Measurements Using a Vector Network Analyzer (Page 52) Agilent Measurement Journal - Issue 3 - 2007 - Making Accurate Settling-Time Measurements Using a Vector Network Analyzer (Page 53) Agilent Measurement Journal - Issue 3 - 2007 - Making Accurate Settling-Time Measurements Using a Vector Network Analyzer (Page 54) Agilent Measurement Journal - Issue 3 - 2007 - Making Accurate Settling-Time Measurements Using a Vector Network Analyzer (Page 55) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 56) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 57) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 58) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 59) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 60) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 61) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 62) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 63) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 64) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 65) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 66) Agilent Measurement Journal - Issue 3 - 2007 - Applying Metabolomics Methods to the Study of Bacterial Leaf Blight in Rice Plants (Page 67) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 68) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 69) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 70) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 71) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 72) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 73) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 74) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 75) Agilent Measurement Journal - Issue 3 - 2007 - Measuring Stream Dynamics with Fiber Optics (Page 76) Agilent Measurement Journal - Issue 3 - 2007 - survey (Page survey)
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